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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1112175_1136624_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1112175 - 1136624

Intron Length:

24450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACAAAT

U12 Branch Point Sequence:

GAGGCCACAAAT

Flanking Amino Acid:

MYICHGMTPQNVYYTSNQQL

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

1.1

79.9

Major BPS

57.1

0.18

62.9

30.6

Major PPT

81.7

0.71

0.8

76.1

32.4

Minor 5ss

40.2

-1.1

2.7

46.3

Minor BPS

43.4

-0.4

1.9

56.96

44.6

Associated Gene:

Gene:

GALNT18

Ensembl Gene ID:

ENSAPLG00000014984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015659

939066 - 1154469

215404