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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11159323_11159660_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11159323 - 11159660

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GGTTGCTGCAGT

Flanking Amino Acid:

VLTCILLEHKVVLQSRDYNA

Intron Amino Acid Position:

328

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

66.4

45.1

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

71.7

0.49

64.3

41.5

Minor 5ss

31.5

-2.1

3.1

39.9

45.7

Minor BPS

41.8

-0.5

2.4

62.22

47.1

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747