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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11171243_11173552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11171243 - 11173552

Intron Length:

2310

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCATT

5'SS Class:

major

3'SS Sequence:

CTCTCCTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTCTTCTCATCC

Flanking Amino Acid:

DKNTPFPSLKGNRRALVDQK

Intron Amino Acid Position:

920

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

1.1

81.8

38.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

73.9

0.54

0.9

72.9

Minor 5ss

53.1

0.11

2.6

75.1

40.8

Minor BPS

56.4

0.18

1.8

69.92

41.8

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747