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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11174870_11175047_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11174870 - 11175047

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTAATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACTTCTGAAAT

Flanking Amino Acid:

DARQDVIQDVEISRKVYKGM

Intron Amino Acid Position:

1017

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

76.7

31.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.7

0.71

0.9

75.4

37.8

Minor 5ss

-2.3

3.2

38.4

40.8

Minor BPS

61.1

0.43

1.6

75.17

41.1

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747