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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11183207_11183558_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11183207 - 11183558

Intron Length:

352

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

GTATGTTTGATT

Flanking Amino Acid:

SGLSLASGSQKSDFDSLPSG

Intron Amino Acid Position:

1169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

78.3

32.5

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

80.4

0.68

0.9

74.1

40.3

Minor 5ss

35.1

-1.7

2.8

43.9

Minor BPS

55.2

0.25

1.8

71.91

39.6

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747