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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11183643_11185250_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11183643 - 11185250

Intron Length:

1608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAGGATAT

5'SS Class:

major

3'SS Sequence:

TTTTTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAA

U12 Branch Point Sequence:

TTTTTCTCCACA

Flanking Amino Acid:

TSQDSEVSTVVSNSSGETLG

Intron Amino Acid Position:

1197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

70.4

36.3

Major BPS

74.4

0.61

0.9

63.6

35.5

Major PPT

88.6

0.87

0.6

84.4

23.7

Minor 5ss

38.4

-1.3

3.4

52.1

46.1

Minor BPS

61.2

0.35

79.1

37.4

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747