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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11186238_11186786_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

11186238 - 11186786

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAAATAT

5'SS Class:

major

3'SS Sequence:

TGGAATGGTGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TTTCCATTTATT

Flanking Amino Acid:

QRVYLYEGLLGRDKGSVWDQ

Intron Amino Acid Position:

1286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

35.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

57.8

0.18

1.2

50.2

47.6

Minor 5ss

38.5

-1.3

3.2

47.5

Minor BPS

59.8

0.39

1.9

83.13

37.4

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747