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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11188216_11189304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11188216 - 11189304

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTGCTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

CTGTCTTTATAT

Flanking Amino Acid:

NMIAYMLMIKVNKNDIRKKV

Intron Amino Acid Position:

1383

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

1.1

87.9

29.3

Major BPS

79.2

0.73

75.3

39.4

Major PPT

0.58

66.2

44.7

Minor 5ss

55.9

0.2

2.5

39.7

Minor BPS

57.2

0.3

1.7

72.57

44.6

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747