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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11189416_11190344_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11189416 - 11190344

Intron Length:

929

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTATCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTTCTTATCT

Flanking Amino Acid:

NDILDKLANLNGRELPVRPS

Intron Amino Acid Position:

1420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

79.7

35.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

83.6

0.76

0.8

78.2

35.4

Minor 5ss

36.1

-1.6

3.1

47.2

42.9

Minor BPS

79.8

1.01

1.4

95.48

31.1

Associated Gene:

Gene:

MADD

Ensembl Gene ID:

ENSAPLG00000010515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011038

11152265 - 11204011

51747