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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11235562_11237213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11235562 - 11237213

Intron Length:

1652

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAAGT

5'SS Class:

strong_major

3'SS Sequence:

GATATCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

AGTTCCTTTACA

Flanking Amino Acid:

PKYDGGQPVLGYILERKKKK

Intron Amino Acid Position:

778

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

77.2

37.6

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

73.5

0.53

62.7

43.8

Minor 5ss

35.3

-1.7

3.1

46.5

42.9

Minor BPS

0.72

1.6

78.92

36.6

Associated Gene:

Gene:

MYBPC3

Ensembl Gene ID:

ENSAPLG00000016373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017104

11216012 - 11272712

56701