Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_11261660_11261920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11261660 - 11261920

Intron Length:

261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGATTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTGTGTTTGATT

Flanking Amino Acid:

PPAESSQNTEVPSAGTQPEE

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

73.5

37.1

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

72.5

0.51

1.1

Minor 5ss

32.9

-2

2.9

45.6

Minor BPS

60.2

0.4

1.8

78.01

39.5

Associated Gene:

Gene:

MYBPC3

Ensembl Gene ID:

ENSAPLG00000016373

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017104

11216012 - 11272712

56701