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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11284432_11285131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11284432 - 11285131

Intron Length:

700

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TCGTTTTTCACA

Flanking Amino Acid:

PGPGIMHSETGSKKKIRLYQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.6

32.8

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

78.1

0.63

0.9

73.2

36.4

Minor 5ss

27.4

-2.6

2.9

31.8

42.6

Minor BPS

56.4

0.19

1.7

65.7

41.8

Associated Gene:

Gene:

SPI1

Ensembl Gene ID:

ENSAPLG00000002423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034825

11283609 - 11286221

2613

ENSAPLT00000019117

11284115 - 11300399

16285

ENSAPLT00000002454

11283609 - 11296553

12945