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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11285289_11296459_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11285289 - 11296459

Intron Length:

11171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATCAC

U12 Branch Point Sequence:

TTTCTCCCAAAG

Flanking Amino Acid:

ISTVKERVMVVSYLPRMCLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

75.9

35.2

Major BPS

0.4

1.1

69.4

35.8

Major PPT

0.54

75.4

27.3

Minor 5ss

33.7

-1.9

2.9

Minor BPS

46.4

-0.4

59.32

41.8

Associated Gene:

Gene:

SPI1

Ensembl Gene ID:

ENSAPLG00000002423

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002454

11283609 - 11296553

12945