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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11335496_11338683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11335496 - 11338683

Intron Length:

3188

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCGC

5'SS Class:

major

3'SS Sequence:

TCTTATCTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

GCTTTCTTATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.1

43.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

82.1

0.72

0.8

76.8

31.7

Minor 5ss

27.7

-2.6

35.1

41.4

Minor BPS

67.7

0.63

1.6

80.05

Associated Gene:

Gene:

SLC39A13

Ensembl Gene ID:

ENSAPLG00000002504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022007

11335220 - 11353540

18321

ENSAPLT00000002537

11335220 - 11353540

18321