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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11335496_11340142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11335496 - 11340142

Intron Length:

4647

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTCGC

5'SS Class:

major

3'SS Sequence:

CTATTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TGTTCTCTATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

63.1

43.4

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

86.6

0.82

0.7

84.6

29.9

Minor 5ss

27.7

-2.6

35.1

41.4

Minor BPS

51.6

0.03

1.9

67.59

38.3

Associated Gene:

Gene:

SLC39A13

Ensembl Gene ID:

ENSAPLG00000002504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043881

11335220 - 11353540

18321