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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11338743_11340142_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11338743 - 11340142

Intron Length:

1400

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTCAGTAAC

5'SS Class:

major

3'SS Sequence:

CTATTCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCTAT

U12 Branch Point Sequence:

TGTTCTCTATTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

72.7

38.8

Major BPS

61.2

0.28

1.4

60.7

45.4

Major PPT

86.6

0.82

0.7

84.6

29.9

Minor 5ss

31.9

-2.1

2.6

38.5

39.3

Minor BPS

51.6

0.03

1.9

67.59

38.3

Associated Gene:

Gene:

SLC39A13

Ensembl Gene ID:

ENSAPLG00000002504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022007

11335220 - 11353540

18321

ENSAPLT00000002537

11335220 - 11353540

18321