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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11342773_11344027_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11342773 - 11344027

Intron Length:

1255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTTCTGCTAATT

Flanking Amino Acid:

EKEEKECPGVGCDSKAPAGK

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

69.4

0.44

0.9

67.3

38.1

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

49.1

0.01

2.3

77.59

39.1

Associated Gene:

Gene:

SLC39A13

Ensembl Gene ID:

ENSAPLG00000002504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022007

11335220 - 11353540

18321

ENSAPLT00000002537

11335220 - 11353540

18321

ENSAPLT00000043881

11335220 - 11353540

18321