Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_11350003_11350213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11350003 - 11350213

Intron Length:

211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGATTTTCGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATTAACT

Flanking Amino Acid:

AILLHEIPHEVGDFAILLRA

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

84.8

0.86

85.7

34.9

Major PPT

76.9

0.61

0.9

73.2

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

80.8

1.04

1.5

94.56

31.9

Associated Gene:

Gene:

SLC39A13

Ensembl Gene ID:

ENSAPLG00000002504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043881

11335220 - 11353540

18321

ENSAPLT00000022007

11335220 - 11353540

18321

ENSAPLT00000002537

11335220 - 11353540

18321