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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11350347_11350458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11350347 - 11350458

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TGTGTCTGGAGT

Flanking Amino Acid:

AICAQSPKGAGETVAWILPF

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

67.7

0.44

38.9

Major PPT

79.7

0.67

0.9

73.5

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

47.7

-0.1

1.9

67.84

43.2

Associated Gene:

Gene:

SLC39A13

Ensembl Gene ID:

ENSAPLG00000002504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002537

11335220 - 11353540

18321