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Intron Name: Anas_platyrhynchos_platyrhynchos_5_1136790_1154322_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1136790 - 1154322

Intron Length:

17533

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCATCTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

CCATCTTTAAAG

Flanking Amino Acid:

RMKLYWQFTQGGPIQNRKSK

Intron Amino Acid Position:

560

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

70.2

0.45

70.1

34.2

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

59.3

0.16

1.5

56.97

44.6

Associated Gene:

Gene:

GALNT18

Ensembl Gene ID:

ENSAPLG00000014984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015659

939066 - 1154469

215404