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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11368299_11368420_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11368299 - 11368420

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTAAA

U12 Branch Point Sequence:

CATCACTAAATA

Flanking Amino Acid:

AQCKAVCVEAGMIALRRGAT

Intron Amino Acid Position:

387

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.9

85.6

31.2

Major BPS

65.2

0.38

0.9

65.5

27.9

Major PPT

70.9

0.47

1.1

68.6

42.1

Minor 5ss

39.1

-1.2

3.4

45.5

Minor BPS

48.5

-0.1

1.8

58.9

40.8

Associated Gene:

Gene:

PSMC3

Ensembl Gene ID:

ENSAPLG00000008009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008363

11368172 - 11378784

10613