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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11368503_11368678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11368503 - 11368678

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCTATCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

TGTGCTCAGACT

Flanking Amino Acid:

MQIHSRKMNVSPDVNYEELA

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

71.3

40.1

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

72.1

0.5

0.9

70.5

34.9

Minor 5ss

37.7

-1.4

3.1

47.3

48.3

Minor BPS

-0.2

2.1

68.22

Associated Gene:

Gene:

PSMC3

Ensembl Gene ID:

ENSAPLG00000008009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008363

11368172 - 11378784

10613