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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11368825_11368983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11368825 - 11368983

Intron Length:

159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGTC

5'SS Class:

major

3'SS Sequence:

TGCTTCTACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TCAGTCTGATCA

Flanking Amino Acid:

DGFQPNTQVKVIAATNRVDI

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.2

72.1

39.4

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

70.7

0.47

0.9

35.6

Minor 5ss

32.2

-2

3.4

43.7

44.1

Minor BPS

-0.2

1.8

56.27

Associated Gene:

Gene:

PSMC3

Ensembl Gene ID:

ENSAPLG00000008009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008363

11368172 - 11378784

10613