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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11369081_11369362_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11369081 - 11369362

Intron Length:

282

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTCATCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TCTAGCTGATTT

Flanking Amino Acid:

IDELDAIGTKRFDSEKAGDR

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.85

0.9

75.2

30.5

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

77.2

0.61

0.8

74.3

35.5

Minor 5ss

31.6

-2.1

3.2

40.1

46.3

Minor BPS

45.4

-0.2

2.1

65.22

45.5

Associated Gene:

Gene:

PSMC3

Ensembl Gene ID:

ENSAPLG00000008009

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008363

11368172 - 11378784

10613