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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11378785_11379404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11378785 - 11379404

Intron Length:

620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAATGAGC

5'SS Class:

major

3'SS Sequence:

CCTTGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAG

U12 Branch Point Sequence:

GCCCCCGGGAGC

Flanking Amino Acid:

ALPCSHFFHLKCLQTNGTRG

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

63.4

41.1

Major BPS

40.5

-0.6

1.6

47.5

Major PPT

79.7

0.67

0.8

72.8

Minor 5ss

34.4

-1.8

3.2

43.4

38.1

Minor BPS

-1

2.2

40.27

39.6

Associated Gene:

Gene:

RAPSN

Ensembl Gene ID:

ENSAPLG00000008323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008671

11378712 - 11388049

9338