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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11379605_11380266_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11379605 - 11380266

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTCCTGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

TCTTGGTCACTT

Flanking Amino Acid:

QELAEGLGNKLGLLKLHCLC

Intron Amino Acid Position:

323

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.1

34.3

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

77.4

0.62

0.9

72.3

32.3

Minor 5ss

36.8

-1.5

3.3

49.4

47.1

Minor BPS

40.2

-0.6

2.6

63.16

47.6

Associated Gene:

Gene:

RAPSN

Ensembl Gene ID:

ENSAPLG00000008323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008671

11378712 - 11388049

9338