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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11395284_11401595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

11395284 - 11401595

Intron Length:

6312

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAG

U12 Branch Point Sequence:

TGTTTTTTTTCT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

71.5

41.1

Major BPS

54.4

0.11

1.4

63.4

35.6

Major PPT

87.6

0.85

0.7

81.2

36.5

Minor 5ss

39.7

-1.2

2.8

46.4

44.2

Minor BPS

43.2

-0.4

3.5

75.76

41.1

Associated Gene:

Gene:

CELF1

Ensembl Gene ID:

ENSAPLG00000020823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034042

11391502 - 11435651

44150