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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11419642_11435612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11419642 - 11435612

Intron Length:

15971

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGAACC

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTTCATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTATTTTTCATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

74.3

34.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

83.4

0.75

0.7

80.3

31.6

Minor 5ss

40.8

-1

2.8

43.8

Minor BPS

58.6

0.26

1.7

71.01

35.8

Associated Gene:

Gene:

CELF1

Ensembl Gene ID:

ENSAPLG00000020823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034042

11391502 - 11435651

44150