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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11470285_11472101_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11470285 - 11472101

Intron Length:

1817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGATGTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAT

U12 Branch Point Sequence:

TCTGCCTGATGT

Flanking Amino Acid:

CVFAGSQRLTDEHPRSRDGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

69.9

41.1

Major BPS

0.27

1.3

53.3

44.2

Major PPT

75.7

0.58

45.1

Minor 5ss

32.4

-2

3.2

43.2

Minor BPS

47.3

-0.1

2.1

68.24

48.3

Associated Gene:

Gene:

FAM180B

Ensembl Gene ID:

ENSAPLG00000018391

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036646

11470218 - 11472906

2689