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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11521181_11526406_R

Intron Information:

Intron Rank:

152221

Intron Class:

major

Intron Phase:

Intron Coordinates:

11521181 - 11526406

Intron Length:

5226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTAATTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTTTCTCTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

70.6

41.4

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

0.9

74.9

38.8

Minor 5ss

36.7

-1.5

3.3

50.2

46.4

Minor BPS

64.7

0.54

1.9

88.58

36.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029480

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044412

11519976 - 11526583

6608