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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11601898_11623415_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

11601898 - 11623415

Intron Length:

21518

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTCTTTTCACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

90.8

0.92

0.6

87.1

23.5

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

61.7

0.36

1.7

75.92

35.5

Associated Gene:

Gene:

FUT8

Ensembl Gene ID:

ENSAPLG00000009017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034445

11601817 - 11670862

69046

ENSAPLT00000009408

11579293 - 11670862

91570