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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11659602_11660196_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11659602 - 11660196

Intron Length:

595

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGGGTATT

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TTGCAGTTAATA

Flanking Amino Acid:

RKLGFKHPVIGVHVRRTDKV

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

77.8

38.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

84.3

0.77

0.8

76.4

37.7

Minor 5ss

34.4

-1.8

3.2

42.1

44.8

Minor BPS

49.1

-0

2.2

65.65

Associated Gene:

Gene:

FUT8

Ensembl Gene ID:

ENSAPLG00000009017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034445

11601817 - 11670862

69046

ENSAPLT00000009408

11579293 - 11670862

91570