Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_1195157_1195249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1195157 - 1195249

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

TCTGTTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

ATGAGCTTAACT

Flanking Amino Acid:

ESHPGQKQSTTFRRLLISKL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

32.8

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

84.5

0.78

0.7

80.6

31.5

Minor 5ss

38.4

-1.3

41.2

Minor BPS

64.2

0.52

1.8

79.18

42.8

Associated Gene:

Gene:

EIF4G2

Ensembl Gene ID:

ENSAPLG00000005642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005985

1193190 - 1201440

8251