Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_1196890_1196985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1196890 - 1196985

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCAGA

5'SS Class:

strong_major

3'SS Sequence:

CCTAATAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTTTTCATCT

Flanking Amino Acid:

GLADMFGQMPGSGIGTGPGV

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

70.6

41.3

Major BPS

100

1.24

0.5

100

Major PPT

61.7

0.26

54.8

38.9

Minor 5ss

44.8

-0.6

2.6

57.7

46.6

Minor BPS

55.2

0.24

1.8

76.37

40.5

Associated Gene:

Gene:

EIF4G2

Ensembl Gene ID:

ENSAPLG00000005642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005985

1193190 - 1201440

8251