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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11975619_11978396_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11975619 - 11978396

Intron Length:

2778

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

GTGGCTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACAGAT

U12 Branch Point Sequence:

TGTGGCTTAAAC

Flanking Amino Acid:

ASGFQATFTSGSGTKLLKNE

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

65.4

Major BPS

66.3

0.41

37.5

Major PPT

60.3

0.23

1.1

54.9

43.9

Minor 5ss

36.6

-1.5

3.3

46.2

43.5

Minor BPS

55.2

0.14

68.33

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043572

11975406 - 11990083

14678