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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11982956_11983590_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11982956 - 11983590

Intron Length:

635

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTGTA

5'SS Class:

major

3'SS Sequence:

TTTTCTTCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TTCTTTGTGACC

Flanking Amino Acid:

RIPYVLDPTYEESHIRGIQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

70.2

35.8

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

0.94

0.6

85.2

29.6

Minor 5ss

29.6

-2.3

3.4

36.2

43.3

Minor BPS

51.7

0.04

68.21

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043572

11975406 - 11990083

14678

ENSAPLT00000017940

11977369 - 11990083

12715

ENSAPLT00000005785

11977539 - 11989308

11770