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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11984830_11985798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11984830 - 11985798

Intron Length:

969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTATT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTCTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TTCTCTGTATTT

Flanking Amino Acid:

TQVTTEEEIYESPSPIETDS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

85.3

31.1

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

77.4

0.62

0.9

72.8

36.9

Minor 5ss

47.9

-0.2

2.5

65.4

40.1

Minor BPS

49.8

0.06

2.2

74.81

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043572

11975406 - 11990083

14678

ENSAPLT00000017940

11977369 - 11990083

12715

ENSAPLT00000005785

11977539 - 11989308

11770