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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11985824_11986555_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11985824 - 11986555

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

TTCATCCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

TAATACTTATGT

Flanking Amino Acid:

QGNRATEPTQVTTEEEIYES

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

73.6

0.53

0.8

35.8

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

49.8

0.06

2.1

71.29

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043572

11975406 - 11990083

14678

ENSAPLT00000017940

11977369 - 11990083

12715

ENSAPLT00000005785

11977539 - 11989308

11770