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Intron Name: Anas_platyrhynchos_platyrhynchos_5_11989762_11989993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11989762 - 11989993

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTGATTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

CACCTTTTACCT

Flanking Amino Acid:

LHTTLGFPIQDNSGNTTATT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

80.3

0.68

0.9

73.7

40.9

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

0.01

1.6

61.25

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005604

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043572

11975406 - 11990083

14678

ENSAPLT00000017940

11977369 - 11990083

12715