Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_5_1199291_1199601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1199291 - 1199601

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTGTGG

5'SS Class:

major

3'SS Sequence:

TACTGCTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TCTGTCTTTACT

Flanking Amino Acid:

GIATSDNFMQAFLNVLDQCP

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.8

0.42

1.1

54.3

45.2

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

75.3

0.57

0.9

69.6

36.4

Minor 5ss

35.1

-1.7

3.4

47.5

47.9

Minor BPS

62.9

0.49

1.8

79.16

43.2

Associated Gene:

Gene:

EIF4G2

Ensembl Gene ID:

ENSAPLG00000005642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005985

1193190 - 1201440

8251