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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12016139_12018084_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12016139 - 12018084

Intron Length:

1946

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

ACTTCAGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

GTTACTTCAGTT

Flanking Amino Acid:

NEELFVLPQNGVVKDVCVTE

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

74.7

35.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

74.5

0.55

70.1

39.8

Minor 5ss

34.2

-1.8

2.9

42.9

43.6

Minor BPS

49.4

0.03

1.8

69.86

41.3

Associated Gene:

Gene:

SYT13

Ensembl Gene ID:

ENSAPLG00000006046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006270

12010974 - 12024982

14009