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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12020137_12024316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12020137 - 12024316

Intron Length:

4180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCATTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

CTTCCTATATCT

Flanking Amino Acid:

QWERLKMPEKEPSTGHGEVL

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

0.72

0.8

73.2

36.1

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

0.11

1.9

74.16

42.7

Associated Gene:

Gene:

SYT13

Ensembl Gene ID:

ENSAPLG00000006046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006270

12010974 - 12024982

14009