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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12042325_12043181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12042325 - 12043181

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTTAT

U12 Branch Point Sequence:

TTTTCTTTTTTT

Flanking Amino Acid:

PELQEFSDPTASESIISVPT

Intron Amino Acid Position:

478

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.9

81.8

38.5

Major BPS

0.5

59.6

38.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

43.8

-0.7

3.2

64.9

46.4

Minor BPS

46.2

-0.2

3.6

83.31

38.3

Associated Gene:

Gene:

PRDM11

Ensembl Gene ID:

ENSAPLG00000006096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021649

12040160 - 12065158

24999

ENSAPLT00000006320

12040160 - 12090921

50762

ENSAPLT00000042906

12040160 - 12079677

39518

ENSAPLT00000039195

12039527 - 12065305

25779