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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12063977_12064213_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12063977 - 12064213

Intron Length:

237

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGATA

5'SS Class:

strong_major

3'SS Sequence:

CTCACACCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCCAT

U12 Branch Point Sequence:

TCTGCCTGACCT

Flanking Amino Acid:

MKAVVCESCQEYFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

83.9

28.9

Major BPS

63.5

0.33

1.2

72.5

34.6

Major PPT

65.7

0.35

0.9

57.6

32.1

Minor 5ss

30.4

-2.2

3.2

46.4

Minor BPS

56.6

0.28

1.9

76.42

46.1

Associated Gene:

Gene:

PRDM11

Ensembl Gene ID:

ENSAPLG00000006096

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021649

12040160 - 12065158

24999