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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12125485_12128915_R

Intron Information:

Intron Rank:

145196

Intron Class:

major

Intron Phase:

Intron Coordinates:

12125485 - 12128915

Intron Length:

3431

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CTTTATCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATGTCTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

78.8

0.65

0.8

77.4

30.9

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

0.68

1.6

82.01

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041027

12121361 - 12129007

7647