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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12190413_12192680_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12190413 - 12192680

Intron Length:

2268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TGTTTCTCACCG

Flanking Amino Acid:

TGVERFQNRQGCYTVILNSF

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

0.87

0.8

85.6

Major PPT

76.6

0.6

0.8

69.8

36.6

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

53.2

-0

1.9

63.97

43.8

Associated Gene:

Gene:

TSPAN18

Ensembl Gene ID:

ENSAPLG00000006371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027014

12188522 - 12230111

41590

ENSAPLT00000018829

12188522 - 12204559

16038

ENSAPLT00000006633

12188522 - 12238398

49877