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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12198972_12203424_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12198972 - 12203424

Intron Length:

4453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTCTCCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGTAT

U12 Branch Point Sequence:

TTTTCCTCTATC

Flanking Amino Acid:

IRENKCLLLFFFMFILLIFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

69.3

36.6

Major BPS

-0

1.5

49.2

Major PPT

81.9

0.72

0.7

77.8

24.2

Minor 5ss

36.5

-1.5

3.2

39.8

Minor BPS

64.3

0.43

1.9

79.1

36.4

Associated Gene:

Gene:

TSPAN18

Ensembl Gene ID:

ENSAPLG00000006371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018829

12188522 - 12204559

16038

ENSAPLT00000006633

12188522 - 12238398

49877

ENSAPLT00000027014

12188522 - 12230111

41590