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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12203620_12204382_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12203620 - 12204382

Intron Length:

763

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTC|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TGTTCCATGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAC

U12 Branch Point Sequence:

TGTTCCATGACA

Flanking Amino Acid:

LMFLFNFFIFLGGACLLGVG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.3

83.5

Major BPS

71.3

0.53

1.1

63.1

44.5

Major PPT

70.8

0.47

39.7

Minor 5ss

43.2

-0.7

2.9

61.1

37.5

Minor BPS

70.7

0.64

1.6

80.82

Associated Gene:

Gene:

TSPAN18

Ensembl Gene ID:

ENSAPLG00000006371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027014

12188522 - 12230111

41590

ENSAPLT00000018829

12188522 - 12204559

16038

ENSAPLT00000006633

12188522 - 12238398

49877