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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12204475_12209296_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12204475 - 12209296

Intron Length:

4822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAACCTT

5'SS Class:

major

3'SS Sequence:

TGGTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTCAT

U12 Branch Point Sequence:

GTGTCATTCAGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

71.2

40.6

Major BPS

67.1

0.42

1.4

71.4

45.1

Major PPT

0.65

72.9

42.2

Minor 5ss

37.7

-1.4

3.4

55.8

48.4

Minor BPS

47.5

-0.1

2.3

69.68

46.8

Associated Gene:

Gene:

TSPAN18

Ensembl Gene ID:

ENSAPLG00000006371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027014

12188522 - 12230111

41590

ENSAPLT00000006633

12188522 - 12238398

49877