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Intron Name: Anas_platyrhynchos_platyrhynchos_5_12209387_12229957_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

12209387 - 12229957

Intron Length:

20571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTTCTCTTACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

0.97

0.6

88.1

21.9

Minor 5ss

42.4

-0.8

3.1

59.1

45.6

Minor BPS

61.9

0.37

1.9

80.2

35.2

Associated Gene:

Gene:

TSPAN18

Ensembl Gene ID:

ENSAPLG00000006371

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027014

12188522 - 12230111

41590